Artikel
First steps towards an R-based tool to support the development of search strategies for systematic reviews
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Autoren
Veröffentlicht: | 8. Juni 2022 |
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Gliederung
Text
Introduction: Information retrieval plays an essential role during the conduct of any systematic review and involves the development of search strategies to allow for a comprehensive search of the literature. Here, an objective approach is increasingly used to identify candidate search terms from a test set of relevant citations [1]. However, this often requires the application of complex text analysis software, which may constitute a barrier for some information specialists. Thus, we aim to develop a fit-for-purpose and easy-to-use tool to support the routine development of high-quality search strategies for systematic reviews.
Methods: Text-analytic procedures were performed using the quanteda package and included calculating simple word frequencies and analysing keywords-in-context [2]. Further, an interactive graphical user interface was developed using the shiny package [3].
Results: We present an overview of the basic functionalities of the current development version of our tool and give a brief live demo of the corresponding “Shiny App” to demonstrate that information specialists do not require programming skills or familiarity with R to execute the underlying R code. Further, we provide a tentative roadmap towards the first stable release and discuss potential upcoming features.
Conclusion: An R-based tool has the potential to facilitate the identification of candidate search terms for objectively derived search strategies.
Keywords: literature search, text and data mining, R
References
- 1.
- Hausner E, Guddat C, Hermanns T, Lampert U, Waffenschmidt S. Prospective comparison of search strategies for systematic reviews: an objective approach yielded higher sensitivity than a conceptual one. J Clin Epidemiol. 2016 Sep;77:118-124. DOI: 10.1016/j.jclinepi.2016.05.002
- 2.
- Kenneth B, Watanabe K, Wang H, et al. quanteda: An R package for the quantitative analysis of textual data. Journal of Open Source Software. 2018;3(30):774. DOI: 10.21105/joss.00774
- 3.
- Chang W, Cheng J, Allaire JJ, et al. shiny: Web Application Framework for R. [accessed online: 16/03/2022]. Available from: https://cran.r-project.org/web/packages/shiny/index.html