gms | German Medical Science

71. Jahrestagung der Deutschen Gesellschaft für Neurochirurgie (DGNC)
9. Joint Meeting mit der Japanischen Gesellschaft für Neurochirurgie

Deutsche Gesellschaft für Neurochirurgie (DGNC) e. V.

21.06. - 24.06.2020

Performance of an advanced deep learning model in fully automated detection and segmentation of brain metastases in patients with malignant melanoma

Automatische Detektion und Segmentierung von Hirnmetastasen in Patienten mit malignem Melanom durch ein Deep Learning Model

Meeting Abstract

  • presenting/speaker Lukas Goertz - Universitätsklinikum Köln, Köln, Deutschland
  • Jan Borggrefe - Universitätsklinikum Köln, Köln, Deutschland
  • Rahil Shahzad - Universitätsklinikum Köln, Köln, Deutschland
  • Boris Krischek - Universitätsklinikum Köln, Köln, Deutschland
  • Roland Goldbrunner - Universitätsklinikum Köln, Köln, Deutschland
  • Lenhard Pennig - Universitätsklinikum Köln, Köln, Deutschland

Deutsche Gesellschaft für Neurochirurgie. 71. Jahrestagung der Deutschen Gesellschaft für Neurochirurgie (DGNC), 9. Joint Meeting mit der Japanischen Gesellschaft für Neurochirurgie. sine loco [digital], 21.-24.06.2020. Düsseldorf: German Medical Science GMS Publishing House; 2020. DocP186

doi: 10.3205/20dgnc471, urn:nbn:de:0183-20dgnc4717

Published: June 26, 2020

© 2020 Goertz et al.
This is an Open Access article distributed under the terms of the Creative Commons Attribution 4.0 License. See license information at http://creativecommons.org/licenses/by/4.0/.


Outline

Text

Objective: Cerebral metastases represent an advanced stage of malignant melanoma and requires an adjustment of the oncological treatment concept. Magnetic resonance imaging (MRI) is the imaging modality of choice for detection and follow-up of brain metastasis. Owing to an increasing workload, physician fatigue with the inherent risk of misdiagnosis is a relevant concern, which can affect patient diagnosis, treatment and outcome. The purpose of this study was to develop and evaluate a deep learning model (DLM) based on convolutional neuronal networks that detects and segments brain metastases fully automatically on multiparametric MRI from diverse referring institutions, scanners and vendors in patients with malignant melanoma.

Methods: A total of 54 multiparametric MRI scans (T1-weighted, T1-weighted contrast-enhanced, T2-weighted, Fluid-attenuated inversion recovery sequences) from 54 patients with brain metastasis (mean age: 63.54 ± 13.83 years, 24 females) were used to train and validate the DLM. Independent manual segmentations of the metastases was performed in a voxel-wise manner by two experienced radiologists and served as the ground truth. A three-dimensional convolutional neural network architecture based on DeepMedic (Biomedia, Singapore), which was originally established for detection and segmentation of glioblastoma, was used and underwent dedicated training using five-fold cross validation (5-FCV).

Results: At the time of initial diagnosis, the patients had 102 brain metastases. The average metastasis volume was 2354.27 ± 7809.15 mm3, as determined by the ground truth. Before 5-FCV, the glioblastoma-trained DLM achieved a detection rate of 0.47 (median dice coefficient: 0.64). After 5-FCV, the sensitivity of the DLM increased to 0.87 (p<0.05), with a corresponding median dice coefficient of 0.74 (p<0.05).

Conclusion: After dedicated training using 5-FCV, our DLM detects brain metastases of malignant melanoma in MRI with high accuracy and achieves sufficient segmentation rates despite diverse scanner data. Therefore, it may pose a valuable adjunct for radiologists in cancer imaging.