gms | German Medical Science

66. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V. (GMDS), 12. Jahreskongress der Technologie- und Methodenplattform für die vernetzte medizinische Forschung e. V. (TMF)

26. - 30.09.2021, online

Methods for left-censored cytokine data: a systematic review-based simulation study in the two-sample case

Meeting Abstract

Suche in Medline nach

  • Dominik Thiele - Institut für Medizinische Biometrie und Statistik, Universität zu Lübeck, Universitätsklinikum Schleswig-Holstein, Campus Lübeck, Lübeck, Germany; Airway Research Center North (ARCN), Member of the German Center for Lung Research, Germany
  • Inke R. König - Institut für Medizinische Biometrie und Statistik, Universität zu Lübeck, Universitätsklinikum Schleswig-Holstein, Campus Lübeck, Lübeck, Germany; Airway Research Center North (ARCN), Member of the German Center for Lung Research, Germany

Deutsche Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie. 66. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V. (GMDS), 12. Jahreskongress der Technologie- und Methodenplattform für die vernetzte medizinische Forschung e.V. (TMF). sine loco [digital], 26.-30.09.2021. Düsseldorf: German Medical Science GMS Publishing House; 2021. DocAbstr. 149

doi: 10.3205/21gmds096, urn:nbn:de:0183-21gmds0965

Veröffentlicht: 24. September 2021

© 2021 Thiele et al.
Dieser Artikel ist ein Open-Access-Artikel und steht unter den Lizenzbedingungen der Creative Commons Attribution 4.0 License (Namensnennung). Lizenz-Angaben siehe http://creativecommons.org/licenses/by/4.0/.


Gliederung

Text

Biomarker data plays an important role in the stratification of patients in precision medicine. Although there is a vast variety of candidates, finding suitable profiles is still challenging due to the lack of reproducibility and statistical power [1]. In addition, biomarker data is frequently left-censored, and it is yet unclear how best to handle data where a non-negligible proportion has values under a given detection limit [2]. In fact, many approaches have been suggested in the literature that differ with regard to assumptions and application settings. Also, they have been investigated in different settings as defined, for instance by sample sizes, percentage of non-detects, and the underlying distribution of the data, making the practical choice difficult. In this work we therefore target this issue by summarizing published theoretical and simulation studies in which methods for the analysis of left-censored data are suggested and compared with each other. We performed a systematic review following the PRISMA statement [3] to derive an overview of the existing methods and their applicability in different settings. The identified methods were then compared in an extensive simulation study which was based on left censored candidate biomarker data from the ALLIANCE cohort of the German Center for Lung Research [4]. The distributions of the datasets were all right skewed, and the proportion of censored values ranged from 0% to 90%. The results will help to guide researchers to select the most suitable method for their specific application.

The authors declare that they have no competing interests.

The authors declare that an ethics committee vote is not required.


References

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Lee MJ, Rahbar MH, Brown M, Gensler L, Weisman M, Diekman L, et al. A multiple imputation method based on weighted quantile regression models for longitudinal censored biomarker data with missing values at early visits. BMC Med Res Methodol. 2018;18(1):8. DOI: 10.1186/s12874-017-0463-9 Externer Link
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Page MJ, McKenzie JE, Bossuyt PM, Boutron I, Hoffmann TC, Mulrow CD, et al. The PRISMA 2020 statement: an updated guideline for reporting systematic reviews. BMJ. 2021;372:n71. DOI: 10.1136/bmj.n71 Externer Link
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Fuchs O, Bahmer T, Weckmann M, Dittrich AM, Schaub B, Rösler B, et al. The all age asthma cohort (ALLIANCE) -from early beginnings to chronic disease: a longitudinal cohort study. BMC Pulm Med. 2018;18(1):140. DOI: 10.1186/s12890-018-0705-6 Externer Link